Index

A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | T | U | V | X | Y | Z

A

A (ndb_adapter.enums.ConformationType attribute)
A_DNA (ndb_adapter.enums.StructuralFeatures attribute)
add_child() (ndb_adapter.html_parser.Tag method)
advanced_search() (ndb_adapter.ndb.NDB static method)
AdvancedResult (class in ndb_adapter.search_result)
AdvancedSearchOptions (class in ndb_adapter.advanced_search_options)
All (ndb_adapter.enums.ConformationType attribute)
(ndb_adapter.enums.EnzymeFunction attribute)
(ndb_adapter.enums.ExpMethod attribute)
(ndb_adapter.enums.HairpinLoopMotif attribute)
(ndb_adapter.enums.InternalLoopMotif attribute)
(ndb_adapter.enums.NaFeature attribute)
(ndb_adapter.enums.OtherFunction attribute)
(ndb_adapter.enums.Polymer attribute)
(ndb_adapter.enums.ProteinFunc attribute)
(ndb_adapter.enums.RegulatoryFunction attribute)
(ndb_adapter.enums.ResolutionCutoff attribute)
(ndb_adapter.enums.RnaStructures attribute)
(ndb_adapter.enums.RnaType attribute)
(ndb_adapter.enums.StructuralFeatures attribute)
(ndb_adapter.enums.StructuralFunction attribute)
analyze() (ndb_adapter.html_parser.NDBHtmlParser method)
And (ndb_adapter.enums.AndOr attribute)
AndOr (class in ndb_adapter.enums)
annotation (ndb_adapter.search_report.RNA3DMotifReport attribute)
Antibiotic (ndb_adapter.enums.OtherFunction attribute)
Antibody (ndb_adapter.enums.OtherFunction attribute)
Aptamer (ndb_adapter.enums.RnaType attribute)
authors (ndb_adapter.search_report.NDBStatusReport attribute)
(ndb_adapter.search_report.SimpleReport attribute)

B

B (ndb_adapter.enums.ConformationType attribute)
B_2_21_2 (ndb_adapter.enums.SpaceGroup attribute)
B_DNA (ndb_adapter.enums.StructuralFeatures attribute)
BasePair (class in ndb_adapter.enums)
BasePairParameter (ndb_adapter.enums.ReportType attribute)
BasePairParameterReport (class in ndb_adapter.search_report)
BasePairStepParameter (ndb_adapter.enums.ReportType attribute)
BasePairStepParameterReport (class in ndb_adapter.search_report)
BasePhosphate (class in ndb_adapter.enums)
BaseStack (class in ndb_adapter.enums)
BisIntercalation (ndb_adapter.enums.DrugBinding attribute)
BPh_0 (ndb_adapter.enums.BasePhosphate attribute)
bph_0 (ndb_adapter.search_report.RNA3DBasePhosphateRelFreqReport attribute)
BPh_1 (ndb_adapter.enums.BasePhosphate attribute)
bph_1 (ndb_adapter.search_report.RNA3DBasePhosphateRelFreqReport attribute)
BPh_2 (ndb_adapter.enums.BasePhosphate attribute)
bph_2 (ndb_adapter.search_report.RNA3DBasePhosphateRelFreqReport attribute)
BPh_3 (ndb_adapter.enums.BasePhosphate attribute)
bph_3 (ndb_adapter.search_report.RNA3DBasePhosphateRelFreqReport attribute)
BPh_4 (ndb_adapter.enums.BasePhosphate attribute)
bph_4 (ndb_adapter.search_report.RNA3DBasePhosphateRelFreqReport attribute)
BPh_5 (ndb_adapter.enums.BasePhosphate attribute)
bph_5 (ndb_adapter.search_report.RNA3DBasePhosphateRelFreqReport attribute)
BPh_6 (ndb_adapter.enums.BasePhosphate attribute)
bph_6 (ndb_adapter.search_report.RNA3DBasePhosphateRelFreqReport attribute)
BPh_7 (ndb_adapter.enums.BasePhosphate attribute)
bph_7 (ndb_adapter.search_report.RNA3DBasePhosphateRelFreqReport attribute)
BPh_8 (ndb_adapter.enums.BasePhosphate attribute)
bph_8 (ndb_adapter.search_report.RNA3DBasePhosphateRelFreqReport attribute)
BPh_9 (ndb_adapter.enums.BasePhosphate attribute)
bph_9 (ndb_adapter.search_report.RNA3DBasePhosphateRelFreqReport attribute)
buckle (ndb_adapter.search_report.BasePairParameterReport attribute)
Bulge (ndb_adapter.enums.NaFeature attribute)

C

c3_o3_p_o5 (ndb_adapter.search_report.NABackboneTorsionReport attribute)
c4_c3_o3_p (ndb_adapter.search_report.NABackboneTorsionReport attribute)
c5_c4_c3_o3 (ndb_adapter.search_report.NABackboneTorsionReport attribute)
C_1_2_1 (ndb_adapter.enums.SpaceGroup attribute)
C_2_2_2 (ndb_adapter.enums.SpaceGroup attribute)
C_2_2_21 (ndb_adapter.enums.SpaceGroup attribute)
cell_a (ndb_adapter.search_report.CellDimensionsReport attribute)
(ndb_adapter.summary_result.SummaryResult attribute)
cell_alpha (ndb_adapter.search_report.CellDimensionsReport attribute)
(ndb_adapter.summary_result.SummaryResult attribute)
cell_b (ndb_adapter.search_report.CellDimensionsReport attribute)
(ndb_adapter.summary_result.SummaryResult attribute)
cell_beta (ndb_adapter.search_report.CellDimensionsReport attribute)
(ndb_adapter.summary_result.SummaryResult attribute)
cell_c (ndb_adapter.search_report.CellDimensionsReport attribute)
(ndb_adapter.summary_result.SummaryResult attribute)
cell_constants (ndb_adapter.summary_result.SummaryResult attribute)
cell_gamma (ndb_adapter.search_report.CellDimensionsReport attribute)
(ndb_adapter.summary_result.SummaryResult attribute)
CellDimensions (ndb_adapter.enums.ReportType attribute)
CellDimensionsReport (class in ndb_adapter.search_report)
chain_id (ndb_adapter.search_report.NABackboneTorsionReport attribute)
CHH (ndb_adapter.enums.BasePair attribute)
chh (ndb_adapter.search_report.RNA3DBasePairRelFreqReport attribute)
Chromosomal (ndb_adapter.enums.StructuralFunction attribute)
CHS (ndb_adapter.enums.BasePair attribute)
chs (ndb_adapter.search_report.RNA3DBasePairRelFreqReport attribute)
Cif (ndb_adapter.ndb_download.DownloadType attribute)
CifNmr (ndb_adapter.ndb_download.DownloadType attribute)
CifNmrRestraints (ndb_adapter.ndb_download.DownloadType attribute)
CifStructureFactors (ndb_adapter.ndb_download.DownloadType attribute)
Citation (ndb_adapter.enums.ReportType attribute)
citation_authors (ndb_adapter.search_report.CitationReport attribute)
(ndb_adapter.summary_result.SummaryResult attribute)
citation_detail (ndb_adapter.search_report.SimpleReport attribute)
citation_journal (ndb_adapter.summary_result.SummaryResult attribute)
citation_pages (ndb_adapter.summary_result.SummaryResult attribute)
citation_pubmed_id (ndb_adapter.summary_result.SummaryResult attribute)
citation_title (ndb_adapter.search_report.CitationReport attribute)
(ndb_adapter.search_report.SimpleReport attribute)
(ndb_adapter.summary_result.SummaryResult attribute)
citation_year (ndb_adapter.summary_result.SummaryResult attribute)
CitationReport (class in ndb_adapter.search_report)
classification (ndb_adapter.search_report.SimpleReport attribute)
CLoop (ndb_adapter.enums.InternalLoopMotif attribute)
common_name (ndb_adapter.search_report.RNA3DMotifReport attribute)
ConformationType (class in ndb_adapter.enums)
count (ndb_adapter.search_result.SearchResult attribute)
CovalentMetalBonds (ndb_adapter.enums.DrugBinding attribute)
CSS (ndb_adapter.enums.BasePair attribute)
css (ndb_adapter.search_report.RNA3DBasePairRelFreqReport attribute)
CWH (ndb_adapter.enums.BasePair attribute)
cwh (ndb_adapter.search_report.RNA3DBasePairRelFreqReport attribute)
CWS (ndb_adapter.enums.BasePair attribute)
cws (ndb_adapter.search_report.RNA3DBasePairRelFreqReport attribute)
CWW (ndb_adapter.enums.BasePair attribute)
cww (ndb_adapter.search_report.RNA3DBasePairRelFreqReport attribute)

D

deposition_date (ndb_adapter.search_report.NDBStatusReport attribute)
description (ndb_adapter.search_report.DescriptorReport attribute)
(ndb_adapter.search_report.SequencesReport attribute)
(ndb_adapter.summary_result.SummaryResult attribute)
Descriptor (ndb_adapter.enums.ReportType attribute)
DescriptorReport (class in ndb_adapter.search_report)
DNA (ndb_adapter.enums.DnaRnaEither attribute)
dna_search() (ndb_adapter.ndb.NDB static method)
DNAEndonuclease (ndb_adapter.enums.EnzymeFunction attribute)
DNAExonuclease (ndb_adapter.enums.EnzymeFunction attribute)
DNAOnly (ndb_adapter.enums.Polymer attribute)
DNAPolymerase (ndb_adapter.enums.EnzymeFunction attribute)
DnaRepairActivator (ndb_adapter.enums.RegulatoryFunction attribute)
DnaRepairRepressor (ndb_adapter.enums.RegulatoryFunction attribute)
DNAReverseTranscriptase (ndb_adapter.enums.EnzymeFunction attribute)
DnaRnaEither (class in ndb_adapter.enums)
DnaSearchOptions (class in ndb_adapter.dna_search_options)
DoubleHelices (ndb_adapter.enums.RnaType attribute)
DoubleHelix (ndb_adapter.enums.StrandDescription attribute)
DoubleMajorGrooveBinder (ndb_adapter.enums.DrugBinding attribute)
DoubleMinorGrooveBinder (ndb_adapter.enums.DrugBinding attribute)
DoubleSheared (ndb_adapter.enums.InternalLoopMotif attribute)
download() (ndb_adapter.ndb.NDB static method)
(ndb_adapter.ndb_download.DownloadHelper static method)
(ndb_adapter.search_report.BasePairParameterReport method)
(ndb_adapter.search_report.BasePairStepParameterReport method)
(ndb_adapter.search_report.CellDimensionsReport method)
(ndb_adapter.search_report.CitationReport method)
(ndb_adapter.search_report.DescriptorReport method)
(ndb_adapter.search_report.NABackboneTorsionReport method)
(ndb_adapter.search_report.NDBStatusReport method)
(ndb_adapter.search_report.RNA3DBasePairRelFreqReport method)
(ndb_adapter.search_report.RNA3DBasePhosphateRelFreqReport method)
(ndb_adapter.search_report.RNA3DBaseStackingRelFreqReport method)
(ndb_adapter.search_report.RNA3DMotifReport method)
(ndb_adapter.search_report.RefinementDataReport method)
(ndb_adapter.search_report.SequencesReport method)
(ndb_adapter.search_report.SimpleReport method)
(ndb_adapter.search_result.AdvancedResult method)
(ndb_adapter.search_result.SimpleResult method)
(ndb_adapter.summary_result.SummaryResult method)
download_file() (ndb_adapter.ndb_download.DownloadHelper static method)
DownloadHelper (class in ndb_adapter.ndb_download)
DownloadType (class in ndb_adapter.ndb_download)
DrugBinding (class in ndb_adapter.enums)
DrugDNA (ndb_adapter.enums.Polymer attribute)

E

Either (ndb_adapter.enums.DnaRnaEither attribute)
Empty (ndb_adapter.enums.BasePair attribute)
(ndb_adapter.enums.BasePhosphate attribute)
(ndb_adapter.enums.BaseStack attribute)
(ndb_adapter.enums.ConformationType attribute)
(ndb_adapter.enums.DrugBinding attribute)
(ndb_adapter.enums.EnzymeFunction attribute)
(ndb_adapter.enums.HairpinLoopMotif attribute)
(ndb_adapter.enums.InternalLoopMotif attribute)
(ndb_adapter.enums.NaFeature attribute)
(ndb_adapter.enums.OtherFunction attribute)
(ndb_adapter.enums.RFactor attribute)
(ndb_adapter.enums.RegulatoryFunction attribute)
(ndb_adapter.enums.ResolutionCutoff attribute)
(ndb_adapter.enums.SpaceGroup attribute)
(ndb_adapter.enums.StrandDescription attribute)
(ndb_adapter.enums.StructuralFunction attribute)
EnzymeFunction (class in ndb_adapter.enums)
Enzymes (ndb_adapter.enums.ProteinFunc attribute)
Equal (ndb_adapter.enums.GreaterLowerEqual attribute)
error() (ndb_adapter.html_parser.NDBHtmlParser method)
experimental_method (ndb_adapter.search_report.SimpleReport attribute)
(ndb_adapter.summary_result.SummaryResult attribute)
ExpMethod (class in ndb_adapter.enums)

F

F_2_2_2 (ndb_adapter.enums.SpaceGroup attribute)
F_2_3 (ndb_adapter.enums.SpaceGroup attribute)
F_4_3_2 (ndb_adapter.enums.SpaceGroup attribute)
find_all() (ndb_adapter.html_parser.NDBHtmlParser method)
find_one() (ndb_adapter.html_parser.NDBHtmlParser method)
Four (ndb_adapter.enums.ResolutionCutoff attribute)
FourWayJunction (ndb_adapter.enums.NaFeature attribute)

G

get() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
(ndb_adapter.search_options.SearchOptions method)
get_author() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_base() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_base_pair() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_base_pair_relative_freq() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_base_phosphate() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_base_phosphate_relative_freq() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_base_stack() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_base_stack_relative_freq() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_cell_a() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_cell_alpha() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_cell_b() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_cell_beta() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_cell_c() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_cell_gamma() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_cell_r_factor() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_cell_resolution() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_conformation() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_count() (ndb_adapter.search_result.SearchResult method)
get_crystal_structure() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_dict() (ndb_adapter.search_report.SimpleReport method)
(ndb_adapter.summary_result.SummaryResult method)
get_dna() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_drug() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_drug_binding() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_enzyme_binding() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_experimental_method() (ndb_adapter.search_options.SearchOptions method)
get_filter_text() (ndb_adapter.search_options.SearchOptions method)
get_hairpin_loop_motif() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_hybrid() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_internal_loop_motif() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_ligand() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_ligand_id() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_ligand_name() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_na_features() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_na_pattern() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_ndb_id() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_nmr() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_nmr_restraints() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_non_redundant_list() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
(ndb_adapter.rna_search_options.RnaSearchOptions method)
get_oligo_seq_between() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_other_binding() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_pdb_id() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_phosphate() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_polymer() (ndb_adapter.search_options.SearchOptions method)
get_protein() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_protein_func() (ndb_adapter.search_options.SearchOptions method)
get_publication_year() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_regulatory_binding() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_released() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_report() (ndb_adapter.search_result.AdvancedResult method)
(ndb_adapter.search_result.SearchResult method)
(ndb_adapter.search_result.SimpleResult method)
get_report_type() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_rna() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_rna_type() (ndb_adapter.rna_search_options.RnaSearchOptions method)
get_space_group() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_statistics() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
(ndb_adapter.search_result.AdvancedResult method)
get_strand_desc() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_structural_binding() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_structural_features() (ndb_adapter.dna_search_options.DnaSearchOptions method)
get_structure_factors() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_sugar() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
get_tree() (ndb_adapter.html_parser.NDBHtmlParser method)
Glycosylase (ndb_adapter.enums.EnzymeFunction attribute)
GNRA (ndb_adapter.enums.HairpinLoopMotif attribute)
GreaterEqual (ndb_adapter.enums.GreaterLower attribute)
(ndb_adapter.enums.GreaterLowerEqual attribute)
GreaterLower (class in ndb_adapter.enums)
GreaterLowerEqual (class in ndb_adapter.enums)
Group1Intron (ndb_adapter.enums.RnaType attribute)
Group2Intron (ndb_adapter.enums.RnaType attribute)

H

H_3 (ndb_adapter.enums.SpaceGroup attribute)
H_3_2 (ndb_adapter.enums.SpaceGroup attribute)
HairpinLoop (ndb_adapter.enums.NaFeature attribute)
HairpinLoopMotif (class in ndb_adapter.enums)
Hammerhead (ndb_adapter.enums.NaFeature attribute)
(ndb_adapter.enums.RnaType attribute)
handle_data() (ndb_adapter.html_parser.NDBHtmlParser method)
handle_endtag() (ndb_adapter.html_parser.NDBHtmlParser method)
handle_starttag() (ndb_adapter.html_parser.NDBHtmlParser method)
Harpin (ndb_adapter.enums.RnaType attribute)
has_attr() (ndb_adapter.html_parser.Tag method)
helical_rise (ndb_adapter.search_report.BasePairStepParameterReport attribute)
helical_twist (ndb_adapter.search_report.BasePairStepParameterReport attribute)
Helicase (ndb_adapter.enums.EnzymeFunction attribute)
higher_resolution (ndb_adapter.search_report.RefinementDataReport attribute)
Histone (ndb_adapter.enums.StructuralFunction attribute)
HMG (ndb_adapter.enums.StructuralFunction attribute)
HybridsChimera (ndb_adapter.enums.Polymer attribute)

I

I_21_21_21 (ndb_adapter.enums.SpaceGroup attribute)
I_21_3 (ndb_adapter.enums.SpaceGroup attribute)
I_2_2_2 (ndb_adapter.enums.SpaceGroup attribute)
I_2_3 (ndb_adapter.enums.SpaceGroup attribute)
I_4 (ndb_adapter.enums.SpaceGroup attribute)
I_41 (ndb_adapter.enums.SpaceGroup attribute)
I_41_2_2 (ndb_adapter.enums.SpaceGroup attribute)
I_41_3_2 (ndb_adapter.enums.SpaceGroup attribute)
I_4_2_2 (ndb_adapter.enums.SpaceGroup attribute)
I_4_3_2 (ndb_adapter.enums.SpaceGroup attribute)
Ignore (ndb_adapter.enums.YesNoIgnore attribute)
inclination (ndb_adapter.search_report.BasePairStepParameterReport attribute)
Integrase (ndb_adapter.enums.EnzymeFunction attribute)
Intercalation (ndb_adapter.enums.DrugBinding attribute)
IntercalationCovalent (ndb_adapter.enums.DrugBinding attribute)
IntercalationMajorGrooveBinder (ndb_adapter.enums.DrugBinding attribute)
IntercalationMinorGrooveBinder (ndb_adapter.enums.DrugBinding attribute)
InternalLoop (ndb_adapter.enums.NaFeature attribute)
InternalLoopMotif (class in ndb_adapter.enums)
Invertase (ndb_adapter.enums.EnzymeFunction attribute)

J

journal (ndb_adapter.search_report.CitationReport attribute)

K

Kinase (ndb_adapter.enums.EnzymeFunction attribute)
KinkTurn (ndb_adapter.enums.InternalLoopMotif attribute)

L

Leadzyme (ndb_adapter.enums.RnaType attribute)
Ligase (ndb_adapter.enums.EnzymeFunction attribute)
(ndb_adapter.enums.RnaType attribute)
lower_resolution (ndb_adapter.search_report.RefinementDataReport attribute)
LowerEqual (ndb_adapter.enums.GreaterLower attribute)
(ndb_adapter.enums.GreaterLowerEqual attribute)
Lyase (ndb_adapter.enums.EnzymeFunction attribute)

M

MajorGrooveBinder (ndb_adapter.enums.DrugBinding attribute)
MajorGrooveBinderCovalent (ndb_adapter.enums.DrugBinding attribute)
max (ndb_adapter.statistics.Statistics attribute)
mean (ndb_adapter.statistics.Statistics attribute)
MethylaseMethytransferase (ndb_adapter.enums.EnzymeFunction attribute)
min (ndb_adapter.statistics.Statistics attribute)
MinorGrooveBinder (ndb_adapter.enums.DrugBinding attribute)
MinorGrooveBinderCovalent (ndb_adapter.enums.DrugBinding attribute)
MismatchBaseParing (ndb_adapter.enums.NaFeature attribute)
model_id (ndb_adapter.search_report.NABackboneTorsionReport attribute)
model_num (ndb_adapter.search_report.BasePairParameterReport attribute)
(ndb_adapter.search_report.BasePairStepParameterReport attribute)
motif_id (ndb_adapter.search_report.RNA3DMotifReport attribute)
MRNACapping (ndb_adapter.enums.EnzymeFunction attribute)

N

NABackboneTorsion (ndb_adapter.enums.ReportType attribute)
NABackboneTorsionReport (class in ndb_adapter.search_report)
NaFeature (class in ndb_adapter.enums)
NDB (class in ndb_adapter.ndb)
ndb_adapter (module)
ndb_adapter.advanced_search_options (module)
ndb_adapter.dna_search_options (module)
ndb_adapter.enums (module)
ndb_adapter.html_parser (module)
ndb_adapter.ndb (module)
ndb_adapter.ndb_base (module)
ndb_adapter.ndb_download (module)
ndb_adapter.report_parser (module)
ndb_adapter.rna_search_options (module)
ndb_adapter.search_options (module)
ndb_adapter.search_report (module)
ndb_adapter.search_result (module)
ndb_adapter.statistics (module)
ndb_adapter.summary_result (module)
ndb_id (ndb_adapter.search_report.SimpleReport attribute)
(ndb_adapter.summary_result.SummaryResult attribute)
NDBBase (class in ndb_adapter.ndb_base)
NDBHtmlParser (class in ndb_adapter.html_parser)
NDBStatus (ndb_adapter.enums.ReportType attribute)
NDBStatusReport (class in ndb_adapter.search_report)
next() (ndb_adapter.html_parser.Tag method)
next_data() (ndb_adapter.html_parser.Tag method)
NMR (ndb_adapter.enums.ExpMethod attribute)
No (ndb_adapter.enums.YesNoIgnore attribute)
NonRedundant (ndb_adapter.enums.RnaStructures attribute)
NonWatsonCrickBaseParing (ndb_adapter.enums.NaFeature attribute)
nucleic_acid_seq (ndb_adapter.summary_result.SummaryResult attribute)
nucleic_acid_seq_with_names (ndb_adapter.summary_result.SummaryResult attribute)

O

o3_p_o5_c5 (ndb_adapter.search_report.NABackboneTorsionReport attribute)
o4_c1_n1_9_c2_4 (ndb_adapter.search_report.NABackboneTorsionReport attribute)
o5_c5_c4_c3 (ndb_adapter.search_report.NABackboneTorsionReport attribute)
OneHalf (ndb_adapter.enums.ResolutionCutoff attribute)
opening (ndb_adapter.search_report.BasePairParameterReport attribute)
Or (ndb_adapter.enums.AndOr attribute)
Other (ndb_adapter.enums.EnzymeFunction attribute)
(ndb_adapter.enums.OtherFunction attribute)
(ndb_adapter.enums.ProteinFunc attribute)
OtherDoubleHelical (ndb_adapter.enums.StructuralFeatures attribute)
OtherFunction (class in ndb_adapter.enums)
OutsideBinder (ndb_adapter.enums.DrugBinding attribute)
OutsideBinderCovalent (ndb_adapter.enums.DrugBinding attribute)

P

P_1 (ndb_adapter.enums.SpaceGroup attribute)
P_1_1_21 (ndb_adapter.enums.SpaceGroup attribute)
P_1_21_1 (ndb_adapter.enums.SpaceGroup attribute)
P_1_2_1 (ndb_adapter.enums.SpaceGroup attribute)
P_21_21_2 (ndb_adapter.enums.SpaceGroup attribute)
P_21_21_21 (ndb_adapter.enums.SpaceGroup attribute)
P_21_2_21 (ndb_adapter.enums.SpaceGroup attribute)
P_21_3 (ndb_adapter.enums.SpaceGroup attribute)
P_2_21_21 (ndb_adapter.enums.SpaceGroup attribute)
P_2_2_21 (ndb_adapter.enums.SpaceGroup attribute)
P_2_3 (ndb_adapter.enums.SpaceGroup attribute)
P_3 (ndb_adapter.enums.SpaceGroup attribute)
P_31 (ndb_adapter.enums.SpaceGroup attribute)
P_31_1_2 (ndb_adapter.enums.SpaceGroup attribute)
P_31_2_1 (ndb_adapter.enums.SpaceGroup attribute)
P_32 (ndb_adapter.enums.SpaceGroup attribute)
P_32_1_2 (ndb_adapter.enums.SpaceGroup attribute)
P_32_2_1 (ndb_adapter.enums.SpaceGroup attribute)
P_3_1_2 (ndb_adapter.enums.SpaceGroup attribute)
P_3_2_1 (ndb_adapter.enums.SpaceGroup attribute)
P_4 (ndb_adapter.enums.SpaceGroup attribute)
P_41 (ndb_adapter.enums.SpaceGroup attribute)
P_41_21_2 (ndb_adapter.enums.SpaceGroup attribute)
P_41_2_2 (ndb_adapter.enums.SpaceGroup attribute)
P_41_3_2 (ndb_adapter.enums.SpaceGroup attribute)
P_42 (ndb_adapter.enums.SpaceGroup attribute)
P_42_21_2 (ndb_adapter.enums.SpaceGroup attribute)
P_42_2_2 (ndb_adapter.enums.SpaceGroup attribute)
P_42_3_2 (ndb_adapter.enums.SpaceGroup attribute)
P_43 (ndb_adapter.enums.SpaceGroup attribute)
P_43_21_2 (ndb_adapter.enums.SpaceGroup attribute)
P_43_2_2 (ndb_adapter.enums.SpaceGroup attribute)
P_43_3_2 (ndb_adapter.enums.SpaceGroup attribute)
P_4_21_2 (ndb_adapter.enums.SpaceGroup attribute)
P_4_2_2 (ndb_adapter.enums.SpaceGroup attribute)
P_6 (ndb_adapter.enums.SpaceGroup attribute)
P_61 (ndb_adapter.enums.SpaceGroup attribute)
P_61_2_2 (ndb_adapter.enums.SpaceGroup attribute)
P_62 (ndb_adapter.enums.SpaceGroup attribute)
P_62_2_2 (ndb_adapter.enums.SpaceGroup attribute)
P_63 (ndb_adapter.enums.SpaceGroup attribute)
P_63_2_2 (ndb_adapter.enums.SpaceGroup attribute)
P_64 (ndb_adapter.enums.SpaceGroup attribute)
P_64_2_2 (ndb_adapter.enums.SpaceGroup attribute)
P_65 (ndb_adapter.enums.SpaceGroup attribute)
P_65_2_2 (ndb_adapter.enums.SpaceGroup attribute)
P_6_2_2 (ndb_adapter.enums.SpaceGroup attribute)
P_minus1 (ndb_adapter.enums.SpaceGroup attribute)
p_o5_c5_c4 (ndb_adapter.search_report.NABackboneTorsionReport attribute)
pair_name (ndb_adapter.search_report.BasePairParameterReport attribute)
pair_num (ndb_adapter.search_report.BasePairParameterReport attribute)
parse_advanced_search_report() (in module ndb_adapter.report_parser)
parse_csv() (in module ndb_adapter.report_parser)
parse_search_report() (in module ndb_adapter.report_parser)
parse_summary() (in module ndb_adapter.report_parser)
parse_to_table() (in module ndb_adapter.report_parser)
parse_xls() (in module ndb_adapter.report_parser)
Pdb (ndb_adapter.ndb_download.DownloadType attribute)
pdb_id (ndb_adapter.search_report.CitationReport attribute)
(ndb_adapter.search_report.NDBStatusReport attribute)
(ndb_adapter.search_report.RNA3DBasePairRelFreqReport attribute)
(ndb_adapter.search_report.RNA3DBasePhosphateRelFreqReport attribute)
(ndb_adapter.search_report.RNA3DBaseStackingRelFreqReport attribute)
(ndb_adapter.search_report.RNA3DMotifReport attribute)
(ndb_adapter.search_report.SimpleReport attribute)
(ndb_adapter.summary_result.SummaryResult attribute)
PdbBioAssembly (ndb_adapter.ndb_download.DownloadType attribute)
PdbNmr (ndb_adapter.ndb_download.DownloadType attribute)
PeptideNucleicAcid (ndb_adapter.enums.Polymer attribute)
Phosphatase (ndb_adapter.enums.EnzymeFunction attribute)
Polymer (class in ndb_adapter.enums)
Polymerase (ndb_adapter.enums.RnaType attribute)
prev() (ndb_adapter.html_parser.Tag method)
prev_data() (ndb_adapter.html_parser.Tag method)
propellor (ndb_adapter.search_report.BasePairParameterReport attribute)
protein_seq (ndb_adapter.summary_result.SummaryResult attribute)
protein_seq_with_names (ndb_adapter.summary_result.SummaryResult attribute)
ProteinDNA (ndb_adapter.enums.Polymer attribute)
ProteinFunc (class in ndb_adapter.enums)
pubmed_id (ndb_adapter.search_report.CitationReport attribute)

Q

QuadrupleHelices (ndb_adapter.enums.RnaType attribute)
(ndb_adapter.enums.StructuralFeatures attribute)
QuadrupleHelix (ndb_adapter.enums.StrandDescription attribute)

R

R_10 (ndb_adapter.enums.RFactor attribute)
R_15 (ndb_adapter.enums.RFactor attribute)
R_20 (ndb_adapter.enums.RFactor attribute)
R_25 (ndb_adapter.enums.RFactor attribute)
R_30 (ndb_adapter.enums.RFactor attribute)
R_35 (ndb_adapter.enums.RFactor attribute)
R_3_2 (ndb_adapter.enums.SpaceGroup attribute)
r_free (ndb_adapter.search_report.RefinementDataReport attribute)
(ndb_adapter.search_report.SimpleReport attribute)
r_obs (ndb_adapter.search_report.RefinementDataReport attribute)
r_work (ndb_adapter.search_report.RefinementDataReport attribute)
(ndb_adapter.search_report.SimpleReport attribute)
RecombinaseOther (ndb_adapter.enums.EnzymeFunction attribute)
RecombinationActivator (ndb_adapter.enums.RegulatoryFunction attribute)
RecombinationReporessor (ndb_adapter.enums.RegulatoryFunction attribute)
refinement (ndb_adapter.summary_result.SummaryResult attribute)
RefinementData (ndb_adapter.enums.ReportType attribute)
RefinementDataReport (class in ndb_adapter.search_report)
reflections (ndb_adapter.search_report.RefinementDataReport attribute)
Regulatory (ndb_adapter.enums.ProteinFunc attribute)
RegulatoryFunction (class in ndb_adapter.enums)
release_date (ndb_adapter.search_report.NDBStatusReport attribute)
(ndb_adapter.search_report.SimpleReport attribute)
ReplicationActivator (ndb_adapter.enums.RegulatoryFunction attribute)
ReplicationReporessor (ndb_adapter.enums.RegulatoryFunction attribute)
report (ndb_adapter.search_result.SearchResult attribute)
report_type() (ndb_adapter.search_report.BasePairParameterReport static method)
(ndb_adapter.search_report.BasePairStepParameterReport static method)
(ndb_adapter.search_report.CellDimensionsReport static method)
(ndb_adapter.search_report.CitationReport static method)
(ndb_adapter.search_report.DescriptorReport static method)
(ndb_adapter.search_report.NABackboneTorsionReport static method)
(ndb_adapter.search_report.NDBStatusReport static method)
(ndb_adapter.search_report.RNA3DBasePairRelFreqReport static method)
(ndb_adapter.search_report.RNA3DBasePhosphateRelFreqReport static method)
(ndb_adapter.search_report.RNA3DBaseStackingRelFreqReport static method)
(ndb_adapter.search_report.RNA3DMotifReport static method)
(ndb_adapter.search_report.RefinementDataReport static method)
(ndb_adapter.search_report.SequencesReport static method)
ReportType (class in ndb_adapter.enums)
reset() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
residue_name (ndb_adapter.search_report.NABackboneTorsionReport attribute)
residue_number (ndb_adapter.search_report.NABackboneTorsionReport attribute)
resolution (ndb_adapter.search_report.SimpleReport attribute)
ResolutionCutoff (class in ndb_adapter.enums)
Resolvase (ndb_adapter.enums.EnzymeFunction attribute)
RFactor (class in ndb_adapter.enums)
RH (ndb_adapter.enums.ConformationType attribute)
Ribonucleoprotein (ndb_adapter.enums.StructuralFunction attribute)
RibosomalProtein (ndb_adapter.enums.StructuralFunction attribute)
Ribosome (ndb_adapter.enums.RnaType attribute)
Riboswitch (ndb_adapter.enums.RnaType attribute)
RiboswitchFrag (ndb_adapter.enums.RnaType attribute)
Ribozyme (ndb_adapter.enums.RnaType attribute)
RibozymeFrag (ndb_adapter.enums.RnaType attribute)
rise (ndb_adapter.search_report.BasePairStepParameterReport attribute)
RNA (ndb_adapter.enums.DnaRnaEither attribute)
RNA3DBasePairRelFreqReport (class in ndb_adapter.search_report)
RNA3DBasePhosphateRelFreqReport (class in ndb_adapter.search_report)
RNA3DBaseStackingRelFreqReport (class in ndb_adapter.search_report)
RNA3DMotifReport (class in ndb_adapter.search_report)
rna_search() (ndb_adapter.ndb.NDB static method)
RNABasePairRelFreq (ndb_adapter.enums.ReportType attribute)
RNABasePhosphateRelFreq (ndb_adapter.enums.ReportType attribute)
RNABaseStackingRelFreq (ndb_adapter.enums.ReportType attribute)
RNAEndonuclease (ndb_adapter.enums.EnzymeFunction attribute)
RNAExonuclease (ndb_adapter.enums.EnzymeFunction attribute)
RNAMotif (ndb_adapter.enums.ReportType attribute)
RNAPolymerase (ndb_adapter.enums.EnzymeFunction attribute)
RnaSearchOptions (class in ndb_adapter.rna_search_options)
RnaseP (ndb_adapter.enums.RnaType attribute)
RnaStructures (class in ndb_adapter.enums)
RnaType (class in ndb_adapter.enums)
roll (ndb_adapter.search_report.BasePairStepParameterReport attribute)

S

s33 (ndb_adapter.search_report.RNA3DBaseStackingRelFreqReport attribute)
s53 (ndb_adapter.search_report.RNA3DBaseStackingRelFreqReport attribute)
s55 (ndb_adapter.search_report.RNA3DBaseStackingRelFreqReport attribute)
S_33 (ndb_adapter.enums.BaseStack attribute)
S_35 (ndb_adapter.enums.BaseStack attribute)
S_55 (ndb_adapter.enums.BaseStack attribute)
SarcinRicin (ndb_adapter.enums.InternalLoopMotif attribute)
SearchOptions (class in ndb_adapter.search_options)
SearchResult (class in ndb_adapter.search_result)
sequence (ndb_adapter.search_report.SequencesReport attribute)
Sequences (ndb_adapter.enums.ReportType attribute)
SequencesReport (class in ndb_adapter.search_report)
set_author() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_base() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_base_pair() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_base_pair_relative_freq() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_base_phosphate() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_base_phosphate_relative_freq() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_base_stack() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_base_stack_relative_freq() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_cell_a() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_cell_alpha() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_cell_b() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_cell_beta() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_cell_c() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_cell_gamma() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_cell_r_factor() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_cell_resolution() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_conformation() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_count() (ndb_adapter.search_result.SearchResult method)
set_crystal_structure() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_dna() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_drug() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_drug_binding() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_enzyme_binding() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_experimental_method() (ndb_adapter.search_options.SearchOptions method)
set_filter_text() (ndb_adapter.search_options.SearchOptions method)
set_hairpin_loop_motif() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_hybrid() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_internal_loop_motif() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_ligand() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_ligand_id() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_ligand_name() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_na_features() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_na_pattern() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_ndb_id() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_nmr() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_nmr_restraints() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_non_redundant_list() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
(ndb_adapter.rna_search_options.RnaSearchOptions method)
set_oligo_seq_between() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_other_binding() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_pdb_id() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_phosphate() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_polymer() (ndb_adapter.search_options.SearchOptions method)
set_protein() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_protein_func() (ndb_adapter.search_options.SearchOptions method)
set_publication_year() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_regulatory_binding() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_released() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_report() (ndb_adapter.search_result.SearchResult method)
(ndb_adapter.statistics.Statistics method)
set_report_type() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_rna() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_rna_type() (ndb_adapter.rna_search_options.RnaSearchOptions method)
set_space_group() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_statistics() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
(ndb_adapter.search_result.AdvancedResult method)
set_strand_desc() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_structural_binding() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_structural_features() (ndb_adapter.dna_search_options.DnaSearchOptions method)
set_structure_factors() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
set_sugar() (ndb_adapter.advanced_search_options.AdvancedSearchOptions method)
shear (ndb_adapter.search_report.BasePairParameterReport attribute)
shift (ndb_adapter.search_report.BasePairStepParameterReport attribute)
SignalRecognitionParticle (ndb_adapter.enums.StructuralFunction attribute)
SimpleReport (class in ndb_adapter.search_report)
SimpleResult (class in ndb_adapter.search_result)
SingleStranded (ndb_adapter.enums.StructuralFeatures attribute)
siteUrl (ndb_adapter.ndb_base.NDBBase attribute)
slide (ndb_adapter.search_report.BasePairStepParameterReport attribute)
SmallNucleotideFrag (ndb_adapter.enums.RnaType attribute)
space_group (ndb_adapter.search_report.CellDimensionsReport attribute)
(ndb_adapter.summary_result.SummaryResult attribute)
SpaceGroup (class in ndb_adapter.enums)
SpliceosomalProtein (ndb_adapter.enums.RegulatoryFunction attribute)
stagger (ndb_adapter.search_report.BasePairParameterReport attribute)
StatisticReport (class in ndb_adapter.search_report)
Statistics (class in ndb_adapter.statistics)
statistics (ndb_adapter.search_result.AdvancedResult attribute)
stats (ndb_adapter.search_report.StatisticReport attribute)
std_dev (ndb_adapter.statistics.Statistics attribute)
step_name (ndb_adapter.search_report.BasePairStepParameterReport attribute)
step_num (ndb_adapter.search_report.BasePairStepParameterReport attribute)
StrandDescription (class in ndb_adapter.enums)
stretch (ndb_adapter.search_report.BasePairParameterReport attribute)
Structural (ndb_adapter.enums.ProteinFunc attribute)
StructuralFeatures (class in ndb_adapter.enums)
StructuralFunction (class in ndb_adapter.enums)
structure_ref (ndb_adapter.search_report.RefinementDataReport attribute)
summary() (ndb_adapter.ndb.NDB static method)
SummaryResult (class in ndb_adapter.summary_result)
Synthetase (ndb_adapter.enums.EnzymeFunction attribute)

T

T (ndb_adapter.enums.ConformationType attribute)
Tag (class in ndb_adapter.html_parser)
Telomerase (ndb_adapter.enums.RnaType attribute)
TelomereBinding (ndb_adapter.enums.StructuralFunction attribute)
THH (ndb_adapter.enums.BasePair attribute)
thh (ndb_adapter.search_report.RNA3DBasePairRelFreqReport attribute)
Three (ndb_adapter.enums.ResolutionCutoff attribute)
ThreeHalf (ndb_adapter.enums.ResolutionCutoff attribute)
ThreeWayJunction (ndb_adapter.enums.NaFeature attribute)
Thrombin (ndb_adapter.enums.EnzymeFunction attribute)
THS (ndb_adapter.enums.BasePair attribute)
ths (ndb_adapter.search_report.RNA3DBasePairRelFreqReport attribute)
tilt (ndb_adapter.search_report.BasePairStepParameterReport attribute)
tip (ndb_adapter.search_report.BasePairStepParameterReport attribute)
title (ndb_adapter.search_report.NDBStatusReport attribute)
(ndb_adapter.search_report.SimpleReport attribute)
(ndb_adapter.summary_result.SummaryResult attribute)
TLoop (ndb_adapter.enums.HairpinLoopMotif attribute)
Topoisomerase (ndb_adapter.enums.EnzymeFunction attribute)
Transcription (ndb_adapter.enums.RegulatoryFunction attribute)
TranscriptionActivator (ndb_adapter.enums.RegulatoryFunction attribute)
TranscriptionActivatorRepressor (ndb_adapter.enums.RegulatoryFunction attribute)
TranscriptionCoactivator (ndb_adapter.enums.RegulatoryFunction attribute)
TranscriptionCorepressor (ndb_adapter.enums.RegulatoryFunction attribute)
TranscriptionElongation (ndb_adapter.enums.RegulatoryFunction attribute)
TranscriptionReporessor (ndb_adapter.enums.RegulatoryFunction attribute)
TranscriptionTermination (ndb_adapter.enums.RegulatoryFunction attribute)
TranslationElongation (ndb_adapter.enums.RegulatoryFunction attribute)
TranslationInitiator (ndb_adapter.enums.RegulatoryFunction attribute)
TranslationTermination (ndb_adapter.enums.RegulatoryFunction attribute)
Transposase (ndb_adapter.enums.EnzymeFunction attribute)
TripleHelices (ndb_adapter.enums.RnaType attribute)
(ndb_adapter.enums.StructuralFeatures attribute)
TripleHelix (ndb_adapter.enums.StrandDescription attribute)
TripleSheared (ndb_adapter.enums.InternalLoopMotif attribute)
TRNA (ndb_adapter.enums.RnaType attribute)
TRNAFrag (ndb_adapter.enums.RnaType attribute)
TRNAModifying (ndb_adapter.enums.EnzymeFunction attribute)
TSS (ndb_adapter.enums.BasePair attribute)
tss (ndb_adapter.search_report.RNA3DBasePairRelFreqReport attribute)
Twenty (ndb_adapter.enums.ResolutionCutoff attribute)
TWH (ndb_adapter.enums.BasePair attribute)
twh (ndb_adapter.search_report.RNA3DBasePairRelFreqReport attribute)
Two (ndb_adapter.enums.ResolutionCutoff attribute)
TwoHalf (ndb_adapter.enums.ResolutionCutoff attribute)
TWS (ndb_adapter.enums.BasePair attribute)
tws (ndb_adapter.search_report.RNA3DBasePairRelFreqReport attribute)
TWW (ndb_adapter.enums.BasePair attribute)
tww (ndb_adapter.search_report.RNA3DBasePairRelFreqReport attribute)

U

U (ndb_adapter.enums.ConformationType attribute)
UNCG (ndb_adapter.enums.HairpinLoopMotif attribute)
update() (ndb_adapter.summary_result.SummaryResult method)

V

ViralCoat (ndb_adapter.enums.StructuralFunction attribute)
ViralFrag (ndb_adapter.enums.RnaType attribute)
Virus (ndb_adapter.enums.RnaType attribute)

X

x_disp (ndb_adapter.search_report.BasePairStepParameterReport attribute)
XmlComplete (ndb_adapter.ndb_download.DownloadType attribute)
XmlCoordinates (ndb_adapter.ndb_download.DownloadType attribute)
XmlHeader (ndb_adapter.ndb_download.DownloadType attribute)
XRAY (ndb_adapter.enums.ExpMethod attribute)

Y

y_disp (ndb_adapter.search_report.BasePairStepParameterReport attribute)
year (ndb_adapter.search_report.CitationReport attribute)
Yes (ndb_adapter.enums.YesNoIgnore attribute)
YesNoIgnore (class in ndb_adapter.enums)

Z

Z (ndb_adapter.enums.ConformationType attribute)
Z_DNA (ndb_adapter.enums.StructuralFeatures attribute)